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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
ACC rs768904 chr7:47188122 G/A DRGX chr10:50572226-50604062:- 0.76 7.9 1.85E-10 Box Plot
ACC rs76997913 chr1:119738945 T/A PRHOXNB chr13:28552243-28562774:- 0.64 8.7 1.02E-11 Box Plot
ACC rs77010632 chr15:33048553 C/G PRHOXNB chr13:28552243-28562774:- 0.69 8.6 1.43E-11 Box Plot
ACC rs7707518 chr5:71573856 C/T GDPD5 chr11:75145685-75236948:- -0.78 -7.79 2.75E-10 Box Plot
ACC rs77198702 chr17:32523326 C/A TFDP3 chrX:132350697-132352376:- 0.99 8.59 1.52E-11 Box Plot
ACC rs77224205 chr5:120323763 A/G GAGE2D chrX:49207160-49214420:+ 1.22 11.62 4.6E-16 Box Plot
ACC rs77234576 chr8:4004787 T/C PRHOXNB chr13:28552243-28562774:- 0.55 7.53 7.06E-10 Box Plot
ACC rs77257574 chr4:17548884 C/T GC chr4:72607410-72669758:- 0.77 10.88 5.18E-15 Box Plot
ACC rs77265649 chr2:124916422 G/A GC chr4:72607410-72669758:- 0.68 9.87 1.65E-13 Box Plot
ACC rs77277973 chr1:119667278 C/T PRHOXNB chr13:28552243-28562774:- 0.63 9.24 1.46E-12 Box Plot
ACC rs77301557 chr18:37106848 T/C PRHOXNB chr13:28552243-28562774:- 0.7 9.18 1.85E-12 Box Plot
ACC rs773333 chr13:105323522 T/C PRHOXNB chr13:28552243-28562774:- -0.72 -7.77 2.99E-10 Box Plot
ACC rs773336 chr13:105324178 A/G PRHOXNB chr13:28552243-28562774:- -0.72 -7.77 2.99E-10 Box Plot
ACC rs773337 chr13:105324344 G/A PRHOXNB chr13:28552243-28562774:- -0.72 -7.77 2.99E-10 Box Plot
ACC rs773339 chr13:105325057 G/A PRHOXNB chr13:28552243-28562774:- -0.72 -7.77 2.99E-10 Box Plot